Principle Investigators
Vineet Bafna
Ingolf Krueger
Pavel Pevzner
Steve Briggs
Post Docs
Nuno BandeiraDumitru Brinza
Claudiu Farcas
Graduate Students
Fjola BjornsdottirJocelyne Bruand
Natalie Castellana
Banu Dost
Ari Frank
Nitin Gupta
To-Ju Huang
Sangtae Kim
Julio Ng
Sam Payne
Stephen Tanner
Collaborators
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Steve Briggs (UCSD) |
Karl Clauser (Broad) |
Larry David (OHSU) |
Pieter Dorrenstein (UCSD) |
Liliana Florea (Georgetown) |
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David Goodlett (U of Washington) |
Roderic Guigo (U of Barcelona) |
Rajesh Gupta (UCSD) |
Neil Kelleher (UIUC) |
Hon Wei Leong
(NIS, Singapore) |
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Jenny Lill (Genentech) |
Parag Mallick (Cedars Sinai) |
Matthias Mann (MPI) |
Andrei Osterman (Burnham) |
Sherief Reda (Brown) |
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Margie Romine (PNNL) |
Andrej Shevchenko (MPI) |
Richard Smith (PNNL) |
Jeff Smith (Burnham Institute) |
Shamil Sunyaev (Harvard) |
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Haixu Tang (Indiana University) |
Virgil Woods (UCSD) |
Yingming Zhao (UT Southwestern) |
Huilin Zhou (UCSD) |
Roman Zubarev (Uppsala) |
Latest Releases
PepNovo
MS-Clustering
Inspect, MS-Alignment
MS-Dictionary
MS-GeneratingFunction
Spectral Networks
Media Coverage
A powerful tool for PTM discovery (Jan 2008, Journal of Proteome research, Vol 7. Issue 1)
From spectral networks to shotgun sequencing (June 2007, Nature Methods, Vol. 4 No. 6)
Identifying peptides without a database (May 2007, Journal of Proteome Research)
UCSD Computer Scientist Wins Young Investigator Award, Research on Snake Venom Proteins Highlighted (Nov 2006, UCSD)