Members
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Pavel Pevzner, PhD Project Supervisor Ronald R Taylor Professor of Computer Science University of California, San Diego |
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Richard D. Smith,
PhD Project Supervisor Battelle Fellow Pacific Northwest National Laboratories |
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Vineet Bafna, PhD Project Supervisor Assistant Professor, Computer Science University of California, San Diego |
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Andrei Osterman, PhD Project Supervisor Associate Professor Burnham Institute for Medical Research |
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Nitin Gupta Project Lead Graduate Student in Bioinformatics University of California, San Diego |
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Chris Sholley Undergraduate Student Senior, Bioengineering-Bioinformatics |
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Ian Kerman |
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Jesse Rodriguez Undergraduate Student, Senior, Computer Science- Bioinformatics |
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Jamal Benhamida Undergraduate Student, Senior, Computer Science - Bioinformatics |
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Ngan
Nguyen Undergraduate Student Senior: Bioengineering: Bioinformatics. |
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Elisabeth Kain Undergraduate Student Senior, Bioengineering-Bioinformatics |
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Charles Hildebrand Undergraduate Student Junior, Bioengineering: Bioinformatics |
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Vipul Bhargava Graduate Student Bioinformatics Program |
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Noah
Ollikainen Undergraduate Student Senior, Biology: Bioinformatics |
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Jian Wang Graduate Student Bioinformatics Program |
 |
Daniel Goodman Undergraduate Student Senior, Bioengineering-Bioinformatics |
Supported
By 
Whats New
Comparative proteogenomics paper accepted
The
paper including results of all students on
using comparative approaches for analyzing MS/MS data will appear in
Genome Research. The paper is also covered in research highlights
of Nature
Reviews Genetics!
Trypsin paper accepted
"Does Trypsin cut Before Proline?" paper with our undergraduate student Jesse Rodriguez as the first author has been accepted for publication in the Journal of Proteome Research. Congratualtions Jesse!
Consortium alumni
Jesse Rodriguez joins Stanford, Noah Ollikainen joins UCSF and Ian Kerman joins UCSD for graduate studies. Congratulations to all!
Poster at ASMS
Jesse Rodriguez presented a poster on his work on analyzing trypsin specificity at ASMS 2007 in Indianapolis to thousands of mass-spectrometry experts.
HHMI site visit
Mary
Koszalka from HHMI visited us, and learnt about the consortium projects
through presentations made by Jamal Benhamida, Jesse Rodriguez and
Nitin Gupta.
Collaborators
University of California,
San Diego
Pacific Northwest National
Laboratory
Burnham Institute
Howard Hughes Medical
Institute